All posts by GoodMo

What is it?

Is Hybrid Corn good?

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If you haven’t already, read about Mendel and Basic Genetics. Here we will talk more about hybrids and how they are important and controversial in modern agriculture. If you don’t think you’ll want to read about corn, that’s ok most of this isn’t about corn, but corn is a key player later on.

So Hybrids, the definition can be confusing because there are eight different types of hybrids. We’ll talk about three of the most common types:

1. Species Hybridization – Crossing two different species. (ex: Lion and a Tiger) This gives rise to an organism that has two different types of chromosomes and they might not match up. If the chromosomes don’t match then this hybrid can’t reproduce (think about a Mule.) In plants, hybrid speciation (a new species) can occur when this mismatching of the chromosomes produces a infertile organism. However, plants have a trick that they can pull off that animals normally don’t do, plants can double their chromosomes. By doubling their chromosomes, this means that they have two copies from each parent not one and when they go to produce a gamete (sperm or egg) the chromosomes can be divided and a new species is created.

2. Sub-Species Hybridization  – This is when two individual organisms can biologically reproduce, but are found in different areas or look significantly different. An example is a Siberian Tiger and a Bengal tiger (Indian Tiger.)

3. Population Hybridization – The organisms are the same species, could be from the same area, and might even look the same, but are from two populations. This is where the corn comes in. (ex: a flower in the valley and a flower on top of a mountain could be two different populations)

Corn has been bred for hundreds of years for the benefit of humans. It is so specialized that the corn that we eat wouldn’t survive without humans. So, lets say a breeder wants a corn that is disease resistant to leaf blight. Another breeder cultivates a variety that tastes sweeter. These two breeders happen to work for the same institution and during a holiday party they decide to make a cool corn variety that is disease resistant and sweet. So they cross the two purebred lines and get a hybrid. That hybrid generation will have the best traits from both parents. It will be sweet and be disease resistant.

Great! We just made SUPER-Corn. Not quite, when the hybrids cross with other hybrids the next generation will not be as good. The traits will be distributed similar to a bell curve. In fact, each generation after the hybrid cross will have traits that would be seen in a normal population, or what you started with. A corn variety that isn’t particularly sweet and not very good against leaf blight. Great job you just undid all of your work and got fired!

A way to avoid the lose of good traits, also called hybrid vigor is to always have hybrids. If a farmer always plants and uses the first cross of the two corn types (Sweet and Disease Resistant) then they’ll have the best corn. The problem is that you would have to maintain the purebred lines. Have corn that is just really sweet and just have disease resistants. Farmers can’t do this, because they don’t have access to seeds of the purebred lines. Instead farmers pay seed companies for the seeds of the hybrid corn. You could ask why does it matter?

An advantage is that better corn is being produced and might be feeding more people. The disadvantage is that farmers have to pay more for their seeds and have to pay every year, instead of using seed from the previous year’s crop. Not everyone can pay. Farmers in countries that need more food aren’t able to pay the seed companies and end up taking loans they can’t pay back.

There are many types of hybrids, one type: Population Hybridization is able to produce superior offspring. Humans use this ability to better grow food. The problem is the price we pay for better corn.

If you learned something please share.

Rating a GMO

Bt Toxin and Cry1Ac

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Bacillus thuringiensis is a bacteria that can produce a toxin. A gene for this toxin is Cry1Ac. The Bt or Cry1Ac toxin kills insects by cutting up their digestive system. Cry1Ac toxin  does not have effects on non-insects.  We’ll use this table to rate the GMO.

Monsanto first inserted the Cry1Ac gene into cotton (Monsanto, 2002). The Bt Cotton has reduced the use of pesticides. Because of the need for fewer pesticides, fewer farmers report pesticide poisoning. Farmers spend less money on pesticides. Consumers don’t see any price difference. (Pray, Ma, Huang, and Qiao, 2001)

Bt Cotton has also shown to increase yields for farmers in poorer countries (Thirtle, Beyers, Ismael, and Piesse, 2003)

Let’s look at the current rating. 0 for the direct effect on humans. +1 for indirect effects on human health.+1 on profit for local producers. 0 for the profit of consumers. -1 on planet biodiversity. The only measurement left is planet habitat. To see this we need to look at the long term effects.

Why look long term? There is a common question for GMOs and biotechnology. What are the long-term effects? Just looking at one year a system might work, but over several years a system might fail. With just one years worth of data you would conclude an opposite result than a multi-year study.

Compair Bt Toxin 2008 and 2013

One long term effect is resistance of insects to Bt toxin. Insects eat the plant. The plant produces Bt toxin. The insect eats the Bt toxin. The insect dies. This systems might work however life always finds a way. The insects become resistant to the toxin.

Life Finds a way. Jurassic Park, by Michael Crichton

There are two reasons why insects develop resistance to the Bt toxin. One reason is that it is only one compound. If there were many compounds all affecting different parts of the insect it would take longer for the insect to adapt to all of the compounds. The second reason is that the compound kills the insect. Death is the strongest selective pressure in evolution. If an organism dies before mating then all genetic information is gone. If the GMO instead had a compound that disabled the insect instead of killing it would take longer for the insect to adapt.

Compounds that disable but not kill the pest are found in nature. These compounds could be used instead of Bt toxin to prevent insects from becoming resistant.

The first generation of Bt toxin plants produce the toxin throughout the plant, possibly effecting beneficial insects like pollinators. This is reducing the habitat available for insects. Overall this GMO would get a score of 0.  Good at reducing run-off and preventing insect damage, bad a increasing biodiversity and habitat.

Did you learn something? Did we get something wrong? Leave a comment below.

Work Cited:

Monsanto. 2002. Safety Assessment of Bollgard Cotton Event 531. http://www.monsanto.com/products/documents/safety-summaries/bollgard_pss.pdf

Pray, C., Ma, D., Huang, J., & Qiao, F. (2001). Impact of Bt cotton in China.World development, 29(5), 813-825.

Thirtle, C., Beyers, L., Ismael, Y., & Piesse, J. (2003). Can GM-technologies help the poor? The impact of Bt cotton in Makhathini Flats, KwaZulu-Natal.World development, 31(4), 717-732.

Ferre, J.,  Van Rie, J., Machintosh, S. C., (2008). Insecticidal Genetically Modified Crops and Insect Resistance Management (IRM). Progress in Biological Control. 5,  41-85

Devos,  Y., Meihls,  L. N., et al. (2013). Resistance evolution to the first generation of genetically modified Diabrotica-active Bt-maize events by western corn rootworm: management and monitoring considerations. Transgenic Research. 22(2),  269-299

Science Details

Process for Making TransChromo Organisms

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There are currently three main ways to insert genetic information into a higher plant: CRISPR-Cas9, using Agrobacterium tumefaciens, and a Gene Gun.

We will focus on the Gene Gun for this article. The problem with a Gene Gun is the expression. Randomly inserting a gene into an organism causes the expression to decline after time even after screening and selection.

We have gotten better at using the Gene Gun by also incorporating regulatory genes with the gene of interest, however, the placement of that gene is uncontrolled and would effect expression.

What is the solution? Insert a whole chromosome. Let’s say you want to insert a defense protein from Ampelocera hottlei into Ulmus americana, American Elm as a solution for Disease.

After DNA extraction restriction enzyme would be used to cut the DNA selectively. A marker would be used to identify the target gene. Electrophoresis would then separate the large piece of DNA with the target gene. This piece would then go through PCR amplification. The DNA then would be coated onto a gold particle and shot into the target organism, American Elm.

Assuming that the gene gun insertion process would allow this large piece of DNA the benefits of doing this would be that most regulatory genes would also go with the target gene and expression would be preserved. In addition, other genes may carry other unknown benefits to the target organism.

Rating a GMO

How to rate a GMO

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If we gave a GMO a score what would it be? How would we rate a GMO or any technology? We rate based on the three criteria:

Good for People: Improving the physiological health of humans, and is not detrimental to their health.

Good for Planet: Increases the biological diversity and biomass potential (more things can live)

Good for Profit: Is useful, creates value by addressing a need.

You can’t have one measurement for each  category. At least two things need to be measured. These measurements have to focus on both large and small scales. An example of why one measurement would be bad is when a compound causes pollution but cures a disease. While solving the small problem, curing disease, it creates a larger problem of pollution. Pollution would then cause problems to anyone around.

Rating GMO

Super Good is a score of 6.

Good is a score of 4 to 6 with no negative values.

Little Good is a score of 2 to 4 with no negative values.

Ok is a score of 0 to 2 with no negative values.

Little Bad is a Positive score with negative values.

Bad is a score of -1 to -5

Evil is a score of -6.

Philosophy

Pro GMO vs. Non-GMO what are both thinking?

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GMOs are a product of modern technology that has created many to fear the technology. Some people have called for a ban of the technology. While others praising the technology and claim that it will solve many of the world’s problems. This reaction of pessimism and optimism is common with any advancement in technology. This post isn’t about showing how one side is correct and the other wrong, but instead, how each thinks and justifies their position. To examine both sides let’s look at the known knowns.

In 2002 Donald Rumsfeld famously said, “…because as we know, there are known knowns; there are things we know we know. We also know there are known unknowns; that is to say, we know there are some things we do not know. But there are also unknown unknowns – the ones we don’t know we don’t know. And if one looks throughout the history of our country and other free countries, it is the latter category that tend(s) to be the difficult ones.”

He was talking about Iraq and the possibility of the government to give weapons of mass destruction to terrorist groups. Weapons are a technology and have the same problem of pessimism and optimism.

A table showing possible good and bad of technology

The difference between optimist and pessimist is what they value and what carries weight in their thinking.

Scale Known Knowns Unknown

For the optimist, they weigh the Known Knows and the current problems more than the Unknown Unknowns. Biotechnology and the ability to create GMOs can; feed more people, reduce the effects of climate change, lift people out of poverty, cure disease. It is the Known current problems that drive the optimist’s thinking.

Scale Red down Known Knowns Unknown

The Pessimist weigh the Unknown Unknowns more than the Known Knowns. The pessimist might acknowledge the current problems and that GMOs could provide solutions to those problems. They would then point out and say that we can not take the risk of solving the world’s problems with GMOs because we do not fully understand all of the impacts. They could say that we would make bigger problems by using GMOs.

Closing thoughts:
To move forward, both sides have to acknowledge the concerns and way of thinking of the other. The optimist can work on learning more about the unknowns to remove concerns. The pessimist can learn more about the knowns and how the knows can answer unknowns.

If you look at the three color information stop light you will notice that these statements and questions could be applied to any technology. We have just learned and experience some technologies longer and have removed the unknown unknowns.

 

What is it?

What is a GMO?

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Genetically Modified Organism or GMO are living things that have been genetically altered using biotechnology. The exact point at which something becomes a GMO with this definition is a little tricky in part because it relies on the use of technology. What you define as biotechnology can significantly impact what is considered a GMO. Some thought questions:

  1. Is breeding a biotechnology and offspring of breeding a GMO?
  2. Is selection of offspring or sperm and egg based upon genetic screening that shows you the offsprings traits produce a GMO?
  3. Is mutating a organism by exposing it to radiation then genetic screening to see any new traits acquired from the radiation a GMO?
  4. Does DNA methylation, (when adding CH4, one carbon and 4 hydrogen to DNA can inhibit a gene from being expressed) produce a GMO?
  5. Is adding an additional copy of a gene to inhibit a trait (iRNA, a form of knockout) produce a GMO?
  6. Is taking out a gene (CRISPR) produce a GMO?
  7. Is inserting a gene from another organism produce a GMO?
GMO
Photo from: Idaho National Laboratory (flickr.com)

As you can see there is a gradient to what we might consider to be a GMO. The point of this is not to confuse you into thinking a GMO is what it isn’t, but to understand it better. If you are dying to find out the answer; most countries and people would say a GMO would be everything after 3 or 4.

Trends

Biotechnology Heals then Burns Business Models

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Many companies have started focusing on biotechnology and incorporating it into their business model. After Genentech emerged with the first compound produced from bacteria (insulin) pharmaceutical companies started partnering with biotech companies. You could call this the first wave of biotech adoption. The reason for this was that the return on resources spend to develop new drugs was declining. Pharmaceutical companies are spending more to develop less drugs. There are many reasons for this including: easy drug targets already developed, drugs have to be more profitable than the cost of going through approval, and drug companies want drugs that everyone can take (Blockbuster drugs). Pharmaceutical companies couldn’t develop drugs that would make a lot of money while still using the same technology, so in the 1990’s they turned to biotechnology companies to help them make drugs. This healed the business model of the pharmaceutical companies, however now it is threatening their existence like never before.

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Photo from: NTNU, Faculty of Natural Sciences and Technology (flickr.com)

Before the existence of biotechnology companies (companies that focus on new technology), pharmaceutical companies only competed against themselves to make drugs. When Genentech created a drug without being a pharmaceutical company. It licensed it’s ability to create insulin to other companies so Genentech didn’t need to have the capacity to produce it. Biotech companies can now compete with pharmaceutical companies, then why are pharmaceutical companies still around? They will probably turn into what record and network television companies are today. These companies are still around because they have three things: access to an audience, networks, and resources. Record companies have relationships with radio stations and can encourage them to listen to and play a song. Television companies can have millions of people watching a new show. Both can gather resources such as writers, producers, and talent to make new products. And both have more resources than a kid with a youtube channel; recording studios, sets, props, and cash. Pharmaceutical companies will probably change their business model to be more like this.

Just like record and television companies, pharmaceutical companies have all three things: access to audience, network, and resources. Pharmaceutical companies have relationships with doctors that biotech companies do not have. They can introduce drugs to these doctors and so that them prescribe them to patients. They are fluent in navigating the governmental regulation and have cash on hand. Currently pharmaceutical companies are buying biotech companies when they discover a promising drug or drug target, but as pharmaceutical companies become more averse they will want to buy part or all of the licensing rights from these companies. This will push the risk onto the biotech companies and require them to adapt and implement new technology just like they always have.